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AS Type
DFR-B
Ipomoea nil (Japanese morning glory)
dihydroflavonol 4-reductase B
16837
6
5
Mol Gen Genet 1999 Apr;261(3):447-51
5
I+III+IV+VI
APX2
Spinacia oleracea (spinach)
ApxII;ascorbate peroxidase
8520
13
12
Yoshimura K, Yabuta Y, Tamoi M, Ishikawa T, Shigeoka S. Alternatively spliced mRNA variants of chloroplast ascorbate peroxidaseisoenzymes in spinach leaves.Biochem J. 1999 Feb 15;338 ( Pt 1):41-8.PMID: 9931296 [PubMed - indexed for MEDLINE]
4
I+V
WRKY1
Arabidopsis thaliana (thale cress)
At2g04880; F1O13.1; WRKY family transcription factor (ZAP1)
- -
3082
5
4
- -
2
I
CUTA
Arabidopsis thaliana (thale cress)
At2g33740;AtCUTA;T1B8.5;copper-binding protein (CUTA)
104596
6
5
Plant J. 2003 Jun;34(6):856-67.
2
I
Mla6
Hordeum vulgare
- -
17053
3
2
Halterman D, Zhou F, Wei F, Wise RP, Schulze-Lefert P. The MLA6 coiled-coil, NBS-LRR protein confers AvrMla6-dependent resistancespecificity to Blumeria graminis f. sp. hordei in barley and wheat.Plant J. 2001 Feb;25(3):335-48.PMID: 11208025 [PubMed - indexed for MEDLINE]
2
I
f4F15.290
Arabidopsis thaliana (thale cress)
At3g52180; F4F15.290; protein tyrosine phosphatase/kinase interaction sequence protein (PTPKIS1)
3821
12
11
Plant J. 29 (6), 705-715 (2002)
2
I+IV
FCA
Arabidopsis thaliana (thale cress)
At4g16280; FCAALL.331; flowering time control protein / FCA gamma (FCA)
9763
20
19
Macknight R, Bancroft I, Page T, Lister C, Schmidt R, Love K, Westphal L,Murphy G, Sherson S, Cobbett C, Dean C. FCA, a gene controlling flowering time in Arabidopsis, encodes a proteincontaining RNA-binding domains.Cell. 1997 May 30;89(5):737-45.PMID: 9182761 [PubMed - indexed for MEDLINE]
4
I+II+III
glutathione S-transferase
Arabidopsis thaliana (thale cress)
GST30
- -
- -
- -
- -
- -
2
I
calcium-dependent protein kinase
Arabidopsis thaliana (thale cress)
- -
4146
8
7
- -
2
I
rust resistance (L6)
Linum usitatissimum (flax)
L6
4841
4
3
Ayliffe MA, Frost DV, Finnegan EJ, Lawrence GJ, Anderson PA, Ellis JG. Analysis of alternative transcripts of the flax L6 rust resistance gene.Plant J. 1999 Feb;17(3):287-92.PMID: 10097386 [PubMed - indexed for MEDLINE]
2
I
CPRF1
Petroselinum crispum (parsley)
common plant regulatory factor;GBF(G-box binding factor)
8641
12
11
Feldbrugge M, Hahlbrock K, Weisshaar B. The transcriptional regulator CPRF1: expression analysis and gene structure.Mol Gen Genet. 1996 Jul 26;251(6):619-27.PMID: 8757392 [PubMed - indexed for MEDLINE]
2
I
resistance to potato virus Y
Solanum tuberosum subsp. andigena
ry-1
6156
6
5
- -
2
I
variegated and distorted leaf'
Nicotiana tabacum (common tobacco)
VDL'
7861
10
9
Wang Y, Duby G, Purnelle B, Boutry M. Tobacco VDL gene encodes a plastid DEAD box RNA helicase and is involved inchloroplast differentiation and plant morphogenesis.Plant Cell. 2000 Nov;12(11):2129-42.PMID: 11090214 [PubMed - indexed for MEDLINE]
8
I+II+IV+VII
elongation factor 1B alpha-subunit
Arabidopsis thaliana (thale cress)
eEF1Balpha
- -
- -
6
5
Hericourt F, Jupin I. Molecular cloning and characterization of the Arabidopsis thaliana alpha-subunitof elongation factor 1B.FEBS Lett. 1999 Dec 31;464(3):148-52.PMID: 10618495 [PubMed - indexed for MEDLINE]
2
I
U2 snRNP auxiliary factor, small subunit 35a
Oryza sativa
U2AF35a
1277
2
1
Domon C, Lorkovic ZJ, Valcarcel J, Filipowicz W. Multiple forms of the U2 small nuclear ribonucleoprotein auxiliary factor U2AFsubunits expressed in higher plants.J Biol Chem. 1998 Dec 18;273(51):34603-10.PMID: 9852132 [PubMed - indexed for MEDLINE]
2
I
starch branching enzyme 1
Triticum aestivum (bread wheat)
sbe1;SBEI
8020
14
13
Baga M, Glaze S, Mallard CS, Chibbar RN. A starch-branching enzyme gene in wheat produces alternatively splicedtranscripts.Plant Mol Biol. 1999 Aug;40(6):1019-30.PMID: 10527426 [PubMed - indexed for MEDLINE]
3
I+IV
type B-like Cyclin
Zea mays
CycZmG1
416
- -
- -
Sun Y, Flannigan BA, Madison JT, Setter TL. Alternative splicing of cyclin transcripts in maize endosperm.Gene. 1997 Aug 22;195(2):167-75.PMID: 9305761 [PubMed - indexed for MEDLINE]
2
I
holocarboxylase synthetase 2
Arabidopsis thaliana (thale cress)
hcs2
2324
9
8
Denis L, Grossemy M, Douce R, Alban C. Molecular Characterization of a Second Copy of Holocarboxylase Synthetase Gene(hcs2) in Arabidopsis thaliana.J Biol Chem. 2002 Mar 22;277(12):10435-44.PMID: 11784724 [PubMed - in process]
6
I+III+IV
formamidopyrimidine-DNA glycolase family protein / mutM,putative (MMH-1)
Arabidopsis thaliana (thale cress)
AT1G52500, ATFPG-1, ATFPG-2, ATMMH-1, ATMMH-2, F6D8.37, F6D8_37, FPG1, FPG2
3921
10
9
Ohtsubo T, Matsuda O, Iba K, Terashima I, Sekiguchi M, Nakabeppu Y. Molecular cloning of AtMMH, an Arabidopsis thaliana ortholog of the Escherichiacoli mutM gene, and analysis of functional domains of its product.Mol Gen Genet. 1998 Oct;259(6):577-90.PMID: 9819050 [PubMed - indexed for MEDLINE]
2
I+II+III
B'gamma
Arabidopsis thaliana (thale cress)
FCAALL.118;serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B'
- -
- -
- -
- -
Haynes JG, Hartung AJ, Hendershot JD 3rd, Passingham RS, Rundle SJ. Molecular characterization of the B?? regulatory subunit gene family ofArabidopsis protein phosphatase 2A.Eur J Biochem. 1999 Feb;260(1):127-36.PMID: 10091592 [PubMed - indexed for MEDLINE]
2
I
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